Jtnguyen, yes your tree is nutrient deficient. You have not given us any information about the nutrition program you have been giving your tree. A young in ground tree such as yours (I assume the tree is 2 years of age) should have been fertilized 5 times during this past growing season. For your information, citrus trees in their second year are fertilized 5 times equally divided between March and September: citrus trees 3 years of age 4 times: 4 year old trees 3 times and 5+ year old citrus 3 times per year. Now it is November and trees are not fertilized because of the possibility of damaging cold spells. Your tree is deficient in nitrogen and the leaves are also showing a deficiency of manganese. I would not doubt a little deficiency of other minerals. At this point I would not worry to much about the manganese. The bad insect problem suffered by this tree was most likely worsened due to the unhealthy deficiency of this tree. Bugs attack deficient unhealthy trees worse than a strong healthy tree. I guess at this late date I would still give the tree a light application of fertilizer. The quickest method of to correction is by foliar spraying. I would spray the tree with a nitrogen solution. I really do not like recommending fertilizing a citrus tree in November, but this tree is in bad condition. It is a good thing for this tree that it is in San Diego. Today is All Saints Day, and I do not know if there is a Saint for poor sickly trees, but if there is one, I hope it comes to the aid of this tree quickly.